BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B04SP1|AL429514
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1774 1724 0.0
>3x_Contig1774
Length = 27771
Score = 1724 bits (869), Expect = 0.0
Identities = 880/883 (99%), Gaps = 1/883 (0%)
Strand = Plus / Plus
Query: 1 atataaatggttttgagataatagtgcaa-agatgtacaaaaagaatactataaattatt 59
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12171 atataaatggttttgggataatagtgcaacagatgtacaaaaagaatactataaattatt 12230
Query: 60 gcaggaagaaactattcaagggtcacatcaatctgatgcgcattgggaattgaaagagat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12231 gcaggaagaaactattcaagggtcacatcaatctgatgcgcattgggaattgaaagagat 12290
Query: 120 ggcattgtatggtaaatatggtttccctcataataagacattggcatattatcatctgga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12291 ggcattgtatggtaaatatggtttccctcataataagacattggcatattatcatctgga 12350
Query: 180 aaagttcaatgagctaacgaagcgaaccaactcaacagccttattcgaattgagtgtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12351 aaagttcaatgagctaacgaagcgaaccaactcaacagccttattcgaattgagtgtaat 12410
Query: 240 gtattcaactggtcttttcggcaccatagagagagatgttcctaaggcgttaatattatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12411 gtattcaactggtcttttcggcaccatagagagagatgttcctaaggcgttaatattatt 12470
Query: 300 gcatgagtcggcaaacttgggaaatatgcgagccaaacaggcattggcgaaccgtctttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12471 gcatgagtcggcaaacttgggaaatatgcgagccaaacaggcattggcgaaccgtctttt 12530
Query: 360 ccatggattagatttggagcaagatatggtgaagtctaggcttatatatgctgaaattgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12531 ccatggattagatttggagcaagatatggtgaagtctaggcttatatatgctgaaattgc 12590
Query: 420 agactttttgagatcaaaatacacatttgaagagtggaacattaggccaccctatatcga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12591 agactttttgagatcaaaatacacatttgaagagtggaacattaggccaccctatatcga 12650
Query: 480 atcgtacaacttgcgtattcctgatttaggagaggggttaataggaaaacggaattcttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12651 atcgtacaacttgcgtattcctgatttaggagaggggttaataggaaaacggaattcttt 12710
Query: 540 atttagctacagttcagcaaagcgtttaaggcagcggaaaccaaaatcagtggaatcttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12711 atttagctacagttcagcaaagcgtttaaggcagcggaaaccaaaatcagtggaatcttt 12770
Query: 600 ccttcctagcgatcaamacgttcttcttcaacttggtaatgagctcacattgaacaatct 659
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12771 ccttcctagcgatcaaaacgttcttcttcaacttggtaatgagctcacattgaacaatct 12830
Query: 660 tgatgctgcggatgattttgaagctgatagaattagtgatattttctatgctgccctaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12831 tgatgctgcggatgattttgaagctgatagaattagtgatattttctatgctgccctaaa 12890
Query: 720 tagctatcatggtacttataccctcgtaagagacccagaaacagcagcatctatcctaca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12891 tagctatcatggtacttataccctcgtaagagacccagaaacagcagcatctatcctaca 12950
Query: 780 gatggcttattcgaaacataaagatcaagtatctacgatggaggtcttgtccagagctta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12951 gatggcttattcgaaacataaagatcaagtatctacgatggaggtcttgtccagagctta 13010
Query: 840 ttttgctaaatgcgtcgaattattgggccatcagtacatgaga 882
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13011 ttttgctaaatgcgtcgaattattgggccatcagtacatgaga 13053
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6341
Number of Sequences: 1807
Number of extensions: 6341
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)